Leymus Genomics onboards new data scientists
Leymus Genomics onboards new data scientists
Leymus Genomics is very happy to welcome our two new data scientists and partners, Niels Buus Lassen and René Madsen, to our team. This will further our goals of providing world leading data solutions for medium to very large scale genomic labs. Niels and René bring a combined 30 years of working with complex statistical modeling, machine learning, AI, deep learning and developing enterprise software to the company. The addition to the team will open up opportunities for Leymus Genomics to work with data intensive challenges in the genomics field. We are interested in further partnerships in the development of better models for analysing large data sets of genomic data. Leymus Genomics can today provide the full workflow from on-site data storage (DDN), GPUs to accelerate your analysis (official announcement on Monday Oct 8th), WGS secondary analysis on GPUs (Parabricks), and AI consulting and development.
New Partnership with Parabricks
New Partnership with Parabricks
High Performance Secondary Analysis of Genomic Data
Leymus Genomics are happy to announce our partnership with Parabricks, the first to bring secondary analysis with GATK to GPUs in the cloud or local with NVIDIA.
Parabricks provides 30-50 times faster secondary analysis of FASTQ files coming out of sequencers to VCF files that have the variants for tertiary analysis. Parabricks accelerates existing GATK best practices to generate equivalent results as the baseline CPU-only solution.
- Turnkey Solution: Parabricks software runs on standard CPU and GPU nodes available on the cloud and requires no additional setup steps by the user.
- On-Premise and Cloud Agnostic: The Parabricks software can run on local servers like DGX-1 servers or public cloud such as AWS, Google Cloud Services and Microsoft Azure.
- 100% Deterministic and Reproducible: Any configuration of Parabricks software on any platform with any number of resources, generates the exact same results every execution.
- Equivalent results: Parabricks’ pipeline generates equivalent results as baseline GATK 4 best practices pipeline as the same algorithm is used.
Website
NGS Service lab for Scandinavian researchers
We are happy to celebrate our 1 year anniversary since going live at ESHG on the 27th of May in Copenhagen in 2017. To celebrate this we will have a NGS/Microarray service lab campaign from the 1st of May to the 30th of June.
RNA Seq*
249 € per sample
Illumina EPIC 850K Methylation Array**
315 € per sample
RNA Seq + Illumina EPIC 850K Methylation Array***
559 € per sample
Exome Seq****
399 € per sample
* 15 Mill reads min of 48 samples
** Min of 96 samples, High quality samples. If FFPE samples there will be an add-on fee.
*** Min 48 samples 15 Mill reads per sample for RNA seq
**** Min 96 samples, 16 million reads
This is a time-limited campaign which expires August 31stst, 2018
GenomeScan one of the first NGS service labs in the world – a leader in Genomic analysis – from sample to analysis:
- GLP and ISO/IEC 17025 (L518) accredited
- NGS platforms includes HiSeq 4000, HiSeq 2500, Nextseq 500, PacBio, 10x (Chromium platform)
- Transcriptomics, Epigenetics, Single cell seq., WGS, WES
- From sample to bioinformatics analysis
- R&D facility provides the most cutting-edge techniques
- Industry leading turnaround time
- Leymus Genomics will be your local partner in discussing the right approach for your next NGS project. We provide full NGS service for the Nordic countries in collaboration with GenomeScan
Leymus Genomics went live at ESHG 2017
Thank you for all the interesting discussions at ESHG. Pictures from Leymus at ESHG, International High Performance Computing in Frankfurt, and DSKB 2017 (Danish Society for Clinical Biochemistry). We learned that several of our solutions around the NGS workflow – e.g. DDN Data storage and BioDynami NGS library prep – are faster and more simple than existing solutions. We look forward to seeing you in your lab.