Loop Genomics
Loop Genomics
Description
Loop Genomics has developed a synthetic long-read sequencing technology that leverages existing Illumina® short read sequencers coupled with LoopSeq® barcoding technology to enable single-molecule, long-read sequencing on any Illumina® infrastructure.
Technical notes and guidelines
CleanNA
CleanNA
Description
CleanNA develops and produces magnetic bead-based nucleic acid isolation and automation technology for use in:
- NGS sequencing
- Sanger sequencing
- DNA/RNA purification
- Magnetic separation
CleanNA was initiated in 2010 within GC biotech, a distributor of laboratory equipment and reagents with a focus on providing automation solutions. Based on years of experience with the sales, automation and support of magnetic beads based solutions their scientists developed their own proprietary product line that fulfils the need for an affordable nucleic acid purification. As of 2019 CleanNA was spun-off into a separate entity within the Double Helix Group. Nowadays, with this background combined with the feedback from the market and extensive scientific knowledge they aim to be at the forefront of innovative solutions for niche markets that are involved in the isolation of nucleic acids from unique samples that provide specific challenges.
CleanNA works on the basis of a strict quality assurance for a constant output of high-quality products by controlling and standardizing our production processes. They regularly audit the suppliers of their raw materials and subject their products to rigorous quality controls to ensure a stable output. These processes are controlled by their quality officer and is warranted by their ISO 9001:2015 certification.
Validated Viral RNA extraction kits for high throughput
Validated Viral RNA extraction kits for high throughput
We have validated Viral RNA extraction kits for high throughput, we can guarantee shipments on time with a shipment schedule. Our kits are used in national COVID19 test programs in UK, The Netherlands and USA.
New partnership with CleanNA
Leymus Genomics are the new distributors for CleanNA in Scandinavia
Leymus are excited to announce that we have been chosen as distributors of CleanNA products in Scandinavia. CleanNA does magnetic bead based nucleic acid isolations and automation solutions.
For the first time, best in class quality products at best in industry prices.
CleanNA is a reagent manufacturer based near Gouda, the Netherlands, and works on the basis of a strict quality assurance for a constant output of high-quality products by controlling and standardising their production processes. They regularly audit the suppliers of their raw materials and subject the products to rigorous quality controls to ensure a stable output. These processes are controlled by their quality officer and is warranted by their ISO 9001:2015 certification.
New partnership with Centogene
Leymus Genomics are now distributor for Centogene services in Scandinavia
Leymus is excited to announce that we have been chosen as distributors of Centogene services in Scandinavia.
CENTOGENE provides the full spectrum of modern methods and technology for human genetics analysis; it is active in research and is constantly developing new and innovative products for human genetics.
Data storage and machine learning in the genomics era
Data storage and machine learning in the genomics era
Human whole genome sequencing is a cornerstone in the national precision medicine projects emerging in recent years. The sequencing of short reads of DNA has mainly been solved, so in the next decades three crucial questions must be answered: (1) How to store these massive amounts of data being generated every day from national and regional genomics lab, (2) What are the requirements to doing so, and (3) How do we analyse petabytes of genomic data?
Topics:
- Data storage considerations for the pharmaceutical industry, clinical genomics labs, and national genome programs
- Amount of data generated and stored
- Data safety and storage performance
- Combinations of Cloud and on-site storage
- Meeting the needs for a very fast and secure 1.1 PB data storage solution at SciLife Clinical Genomics in Stockholm; the data requirements for a population-scale genomic project in Scotland
- Machine learning on petabytes of genomic data
Details are as follows:
Date: November 19
Time: Whole day event; Rasmus will be presenting at 10:40–11:15.
Location: Charlottehaven, Hjørringgade 12C, 2100, København Ø
SciLife Clinical Genomics Stockholm lab acquires 1.1 Petabyte data storage from Leymus Genomics & DDN
SciLife Clinical Genomics Stockholm lab acquires 1.1 Petabyte data storage from Leymus Genomics & DDN
Leymus Genomics, in partnership with DDN, are now installing the DDN GS7K Data storage platform with 1 petabyte data storage for the SciLifeLab Clinical Genomics Stockholm lab.
As the NovaSeq and HiSeq X systems are becoming the new standard in leading genomics centers in the Nordic, so is the data output. An Illumina NovaSeq 6000 generates approximately 6 terabases in a full S4 two flowcell run over two days. This equates to very roughly 3 terabytes of data per day, or 1.1 petabyte per year. For the Nordic clinical lab, local storage sites for their NGS output is mostly the preferred option to ensure compliance and faster I/O i.e. access to and generation of data.
Bioscience 2019: Rasmus Brøndum is an invited speaker on big data storage in genomics at Aula Medica, Karolinska Institutet
Bioscience 2019: Rasmus Brøndum is an invited speaker on big data storage in genomics at Aula Medica, Karolinska Institutet
Human whole genome sequencing is a cornerstone in the new national precision medicine projects emerging these years and human whole genome sequencing in a clinical setting will be a valuable genomic application potentially replacing todays targeted genomic applications . The sequencing of short-reads of DNA has mainly been solved, and now in the next years two very crucial questions must be answered:
1. How to store these massive amount of data being generated every day from national and regional genomics labs?
2. What are the requirements?
Come join us in Sweden at Karolinska Institutet. The event is an excellent opportunity to meet and exchange ideas with fellow researchers and companies.
Details are as follows:
Date: November 7
Time: Whole day event; Rasmus will be presenting at 15:25–15:45.
Location: Aula Medica, Karolinska Institutet, Nobels väg 6, 171 65 Solna
Leymus Genomics to present at DMS2019 in Copenhagen
Leymus Genomics to present at DMS2019 in Copenhagen
Some of the benefits of LoopSeq® include:
- Uses your existing Illumina sequencer – no extra instruments
- Single-molecule sequencing
- Multiplex single-tube workflow
- Consensus error correction - error rates reduced 40x vs. standard short reads
- Full isoform mapping for transcriptome research
- True quantitative results due to transcript counting using UMIs and full-length reads
- Better resolution on species and strain level for microbiome research
Come join us in Copenhagen in Eigtveds Pakhus for Rasmus’s presentation. The congress is an excellent opportunity to meet and exchange ideas with fellow researchers and companies.
Details are as follows:
Date: November 11
Time: Whole day event; Leymus will be presenting at 15:15–15:40 in Room 2 on the 2nd floor.
Location: Eigtveds Pakhus, Strandgade 25G, 1401 Copenhagen
LoopSeq seminar in Oslo October 10th by Leymus Genomics
LoopSeq seminar in Oslo October 10th by Leymus Genomics
On the 10th of October, Rasmus Brøndum from Leymus Genomics will be presenting an exciting new synthetic long-read sequencing technology that functions on existing short-read Illumina® sequencers. LoopSeq®, developed by Loop Genomics, is an innovative sequencing technology that provides previously inaccessible layers of information from Illumina®-generated sequences. This enables a wide variety of diverse sequencing applications, including sequencing of microbiomes, transcriptomes, targeted amplicons, and more.
Some of the benefits of LoopSeq® include:
- Uses your existing Illumina sequencer – no extra instruments
- Single-molecule sequencing
- Multiplex single-tube workflow
- Consensus error correction – error rates reduced 40x vs. standard short reads
- Full isoform mapping for transcriptome research
- True quantitative results due to transcript counting using UMIs and full-length reads
- Better resolution on species and strain level for microbiome research
Come join us in Oslo at the Ullevål University Hospital for Rasmus’ talk. Number of attendees will be limited so be sure to email us (kristine@leymusgenomics.com) if you’re interested. Details are as follows:
Date: October 10
Time: 13:00 – 14:30
Location: Ullevål University Hospital, Labbygget, Building 25, 1st floor, Green Auditorium. Kirkevejen 166, 0450 Oslo.